Prof. Kristian Franze
Institute of Medical Physics and Max Planck Center for Physics and Medicine

We investigate how cellular forces, local cell, and tissue viscoelasticity, and cellular mechanosensitivity contribute to CNS development and disease. Methods we are exploiting include atomic force microscopy, traction force microscopy, custom-built simple and complex compliant cell culture substrates, optical microscopy including confocal laser scanning microscopy, and cell biological techniques.
Research projects
- Role of tissue mechanics in regulating neuronal development
- Quantification of CNS tissue mechanics in health and disease
- Role of tissue mechanics in pathological processes such as foreign body reactions and spinal cord injuries
- Symmetry breaking of microtubule networks in neurons
- Development of atomic force microscopy-based methods to measure and manipulate tissue mechanics
- Development of AI-based software for automated data/image analysis
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SFB 1540 - EBM: Exploring Brain Mechanics (EBM): Understanding, engineering and exploiting mechanical properties and signals in central nervous system development, physiology and pathology
(Third Party Funds Group – Overall project)
Project leader:
Term: 1. January 2023 - 31. December 2026
Acronym: SFB 1540 - EBM
Funding source: DFG / Sonderforschungsbereich / Transregio (SFB / TRR)
URL: https://www.crc1540-ebm.research.fau.eu/Thecentral nervous system (CNS) is our most complex organ system. Despite tremendousprogress in our understanding of the biochemical, electrical, and geneticregulation of CNS functioning and malfunctioning, many fundamental processesand diseases are still not fully understood. For example, axon growth patterns inthe developing brain can currently not be well-predicted based solely on thechemical landscape that neurons encounter, several CNS-related diseases cannotbe precisely diagnosed in living patients, and neuronal regeneration can stillnot be promoted after spinal cord injuries.
Duringmany developmental and pathological processes, neurons and glial cells aremotile. Fundamentally, motion is drivenby forces. Hence, CNS cells mechanicallyinteract with their surrounding tissue. They adhere to neighbouring cells and extracellular matrix using celladhesion molecules, which provide friction, and generate forces usingcytoskeletal proteins. These forces aretransmitted to the outside world not only to locomote but also to probe themechanical properties of the environment, which has a long overseen huge impacton cell function.
Onlyrecently, groups of several project leaders in this consortium, and a few other groupsworldwide, have discovered an important contribution of mechanical signalsto regulating CNS cell function. For example, they showed that brain tissuemechanics instructs axon growth and pathfinding in vivo, that mechanicalforces play an important role for cortical folding in the developing humanbrain, that the lack of remyelination in the aged brain is due to an increasein brain stiffness in vivo, and that many neurodegenerative diseases areaccompanied by changes in brain and spinal cord mechanics. These first insights strongly suggest thatmechanics contributes to many other aspects of CNS functioning, and it islikely that chemical and mechanical signals intensely interact at the cellularand tissue levels to regulate many diverse cellular processes.
The CRC 1540 EBM synergises the expertise of engineers, physicists,biologists, medical researchers, and clinicians in Erlangen to explore mechanicsas an important yet missing puzzle stone in our understanding of CNSdevelopment, homeostasis, and pathology. Our strongly multidisciplinary teamwith unique expertise in CNS mechanics integrates advanced invivo, in vitro, and in silico techniques across time(development, ageing, injury/disease) and length (cell, tissue, organ) scalesto uncover how mechanical forces and mechanical cell and tissue properties,such as stiffness and viscosity, affect CNS function. We especially focus on(A) cerebral, (B) spinal, and (C) cellular mechanics. Invivo and in vitro studies provide a basic understanding ofmechanics-regulated biological and biomedical processes in different regions ofthe CNS. In addition, they help identify key mechano-chemical factors forinclusion in in silico models and provide data for model calibration andvalidation. In silico models, in turn, allow us to test hypotheses without the need of excessive or even inaccessibleexperiments. In addition, they enable the transfer and comparison of mechanics data and findingsacross species and scales. They also empower us to optimise processparameters for the development of in vitro brain tissue-like matricesand in vivo manipulation of mechanical signals, and, eventually, pavethe way for personalised clinical predictions.
Insummary, we exploit mechanics-based approaches to advance ourunderstanding of CNS function and to provide the foundation for futureimprovement of diagnosis and treatment of neurological disorders.
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SFB 1540 B02: Rückenmarksregeneration in Fröschen vor und nach der Metamorphose (B02)
(Third Party Funds Group – Sub project)
Overall project: SFB 1540: Erforschung der Mechanik des Gehirns (EBM): Verständnis, Engineering und Nutzung mechanischer Eigenschaften und Signale in der Entwicklung, Physiologie und Pathologie des zentralen Nervensystems
Project leader:
Term: 1. January 2023 - 31. December 2026
Acronym: SFB 1540 B02
Funding source: DFG / Sonderforschungsbereich (SFB)ZNS-Gewebe in Fröschen ist vor der Metamorphose regenerativ, nicht jedoch danach. In B02 werden wir mechanische, zelluläre und molekulare Eigenschaften des Rückenmarksgewebes von Xenopus laevis vor und nach der Metamorphose bestimmen. Wir werden testen, ob regeneratives Rückenmark nach einer Verletzung steifer, nicht regeneratives Gewebe jedoch weicher wird, und ob dieser mechanische Unterschied mit ausschlaggebend für den Erfolg neuronaler Regeneration ist. Um dies zu untermauern, werden wir die mechanischen und zellulären Eigenschaften nicht regenerativen Gewebes manipulieren, um so die Regeneration von Nervenzellen zu ermöglichen.
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SFB 1540 A05: In vivo Modell der Mechanik des sich entwickelnden Gehirns (A05)
(Third Party Funds Group – Sub project)
Overall project: SFB 1540 - EBM: Erforschung der Mechanik des Gehirns (EBM): Verständnis, Engineering und Nutzung mechanischer Eigenschaften und Signale in der Entwicklung, Physiologie und Pathologie des zentralen Nervensystems
Project leader:
Term: 1. January 2023 - 31. December 2026
Acronym: SFB 1540 A05
Funding source: DFG / Sonderforschungsbereich (SFB)05 widmet sich der Untersuchung der Mechanik des sich entwickelnden Xenopus laevis Gehirns in vivo. Wir werden eine AFM-basierte Methode entwickeln, die es uns erlaubt, viskoelastische Eigenschaften des in vivo Hirns mit zellulärer Auflösung zu messen. Anschließend werden wir testen, wie Mutationen in Genen, die zu Missbildungen führen und in A02 identifiziert wurden, die Hirnmechanik und Zellmotilität beeinflussen. Schließlich werden wir die mechanischen Eigenschaften dieser Gehirne so manipulieren, dass sie denen gesunden Gewebes ähneln, und den Effekt dieser Manipulationen auf die Hirnmorphologie und Zellmotilität untersuchen.
2026
- Mui, B.W., Wong, J.J., Dumas, C.E., Wang, J.H., Bray, T., Hirose, K.,... Storer, M.A. (2026). Hyaluronic acid and tissue mechanics orchestrate mammalian digit tip regeneration. Science, 392(6794), eady3136-. https://doi.org/10.1126/science.ady3136
- Pillai, E.K., Mukherjee, S., Gampl, N., McGinn, R., Mooslehner, K., Becker, J.,... Franze, K. (2026). Long-range chemical signalling in vivo is regulated by mechanical signals. Nature Materials. https://doi.org/10.1038/s41563-025-02463-9
2025
- Becker, J., Winkel, A.K., Kreysing, E.M., & Franze, K. (2025). Measurement force, speed, and postmortem time affect the ratio of CNS gray-to-white-matter elasticity. Biophysical Journal. https://doi.org/10.1016/j.bpj.2025.03.009
- John, N., Fleming, T., Kolb, J., Lyraki, O., Vásquez Sepúlveda, S.I., Parmar, A.,... Wehner, D. (2025). Biphasic inflammation control by fibroblasts enables spinal cord regeneration in zebrafish. Cell Reports, 44(11). https://doi.org/10.1016/j.celrep.2025.116469
- Kreysing, E.M., Gautier, H.O., Mukherjee, S., Mooslehner, K., Muresan, L., Haarhoff, D.,... Franze, K. (2025). Environmental stiffness regulates neuronal maturation via Piezo1-mediated transthyretin activity. Nature Communications, 16(1). https://doi.org/10.1038/s41467-025-64810-3
- McLaren, S.B., Xue, S.L., Ding, S., Winkel, A.K., Baldwin, O., Dwarakacherla, S.,... Xiong, F. (2025). Differential tissue deformability underlies fluid pressure-driven shape divergence of the avian embryonic brain and spinal cord. Developmental Cell. https://doi.org/10.1016/j.devcel.2025.04.010
- Prieto-López, L., Pereiro, X., Ramírez, E.J., Ruzafa, N., Alonso, A., Franze, K., & Vecino, E. (2025). Substrate stiffness and pressure alter retinal Müller glia response and extracellular matrix production. Biomaterials and Biosystems, 19. https://doi.org/10.1016/j.bbiosy.2025.100114
2024
- Böhringer, D., Cóndor, M., Bischof, L., Czerwinski, T., Gampl, N., Ngo, A.P.,... Gerum, R. (2024). Dynamic traction force measurements of migrating immune cells in 3D biopolymer matrices. Nature Physics, 20(11), 1816-1823. https://doi.org/10.1038/s41567-024-02632-8
- Franze, K. (2024). Sensing the force in living embryos. Nature Materials. https://doi.org/10.1038/s41563-024-02033-5
- Franze, K. (2024). Tensed axons are on fire. Proceedings of the National Academy of Sciences of the United States of America, 121(5), e2321811121. https://doi.org/10.1073/pnas.2321811121
- van Tartwijk, F.W., Wunderlich, L.C., Mela, I., Makarchuk, S., Jakobs, M.A., Qamar, S.,... Kaminski, C.F. (2024). Mutation of the ALS-/FTD-Associated RNA-Binding Protein FUS Affects Axonal Development. Journal of Neuroscience, 44(27). https://doi.org/10.1523/JNEUROSCI.2148-23.2024
2023
- Bertalan, G., Becker, J., Tzschätzsch, H., Morr, A., Herthum, H., Shahryari, M.,... Sack, I. (2023). Mechanical behavior of the hippocampus and corpus callosum: An attempt to reconcile ex vivo with in vivo and micro with macro properties. Journal of the Mechanical Behavior of Biomedical Materials, 138. https://doi.org/10.1016/j.jmbbm.2022.105613
- Carnicer-Lombarte, A., Barone, D.G., Wronowski, F., Malliaras, G.G., Fawcett, J.W., & Franze, K. (2023). Regenerative capacity of neural tissue scales with changes in tissue mechanics post injury. Biomaterials, 303. https://doi.org/10.1016/j.biomaterials.2023.122393
- Kohler, T.N., De Jonghe, J., Ellermann, A.L., Yanagida, A., Herger, M., Slatery, E.M.,... Hollfelder, F. (2023). Plakoglobin is a mechanoresponsive regulator of naive pluripotency. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-39515-0
- Kreysing, E., Hugh, J.M., Foster, S.K., Andresen, K., Greenhalgh, R.D., Pillai, E.K.,... Franze, K. (2023). Effective cell membrane tension is independent of polyacrylamide substrate stiffness. PNAS Nexus, 2(1). https://doi.org/10.1093/pnasnexus/pgac299
- López, E.M., Kabanova, A., Winkel, A., Franze, K., Palacios, I.M., & Martín-Bermudo, M.D. (2023). Constriction imposed by basement membrane regulates developmental cell migration. Plos Biology, 21(6). https://doi.org/10.1371/journal.pbio.3002172
- Pillai, E.K., & Franze, K. (2023). Mechanics in the nervous system: From development to disease. Neuron. https://doi.org/10.1016/j.neuron.2023.10.005
- Sipkova, J., Mukherjee, S., & Franze, K. (2023). The mechanical regulation of Eph/ephrin signaling in the developing brain. Biophysical Journal, 122(3S1), 269a. https://doi.org/10.1016/j.bpj.2022.11.1540
- Sáez, P., Borau, C., Antonovaite, N., & Franze, K. (2023). Brain tissue mechanics is governed by microscale relations of the tissue constituents. Biomaterials, 301. https://doi.org/10.1016/j.biomaterials.2023.122273
2022
- Barone, D.G., Carnicer-Lombarte, A., Tourlomousis, P., Hamilton, R.S., Prater, M., Rutz, A.L.,... Bryant, C.E. (2022). Prevention of the foreign body response to implantable medical devices by inflammasome inhibition. Proceedings of the National Academy of Sciences of the United States of America, 119(12), e2115857119. https://doi.org/10.1073/pnas.2115857119
- Jakobs, M.A., Zemel, A., & Franze, K. (2022). Unrestrained growth of correctly oriented microtubules instructs axonal microtubule orientation. eLife, 11. https://doi.org/10.7554/eLife.77608
- Kaplan, L., Drexler, C., Pfaller, A.M., Brenna, S., Wunderlich, K.A., Dimitracopoulos, A.,... Grosche, A. (2022). Retinal regions shape human and murine Muller cell proteome profile and functionality. Glia. https://doi.org/10.1002/glia.24283
- Schaeffer, J., Weber, I.P., Thompson, A.J., Keynes, R.J., & Franze, K. (2022). Axons in the Chick Embryo Follow Soft Pathways Through Developing Somite Segments. Frontiers in Cell and Developmental Biology, 10. https://doi.org/10.3389/fcell.2022.917589
- Yanagida, A., Corujo-Simon, E., Revell, C.K., Sahu, P., Stirparo, G.G., Aspalter, I.M.,... Chalut, K.J. (2022). Cell surface fluctuations regulate early embryonic lineage sorting. Cell, 185(5), 777-793.e20. https://doi.org/10.1016/j.cell.2022.01.022
2021
- Labouesse, C., Tan, B.X., Agley, C.C., Hofer, M., Winkel, A.K., Stirparo, G.G.,... Chalut, K.J. (2021). StemBond hydrogels control the mechanical microenvironment for pluripotent stem cells. Nature Communications, 12(1). https://doi.org/10.1038/s41467-021-26236-5
- Lippert, A.H., Dimov, I.B., Winkel, A.K., Humphrey, J., Mccoll, J., Chen, K.Y.,... Klenerman, D. (2021). Soft Polydimethylsiloxane-Supported Lipid Bilayers for Studying T Cell Interactions. Biophysical Journal, 120(1), 35-45. https://doi.org/10.1016/j.bpj.2020.11.021
- Oliveri, H., Franze, K., & Goriely, A. (2021). Theory for Durotactic Axon Guidance. Physical Review Letters, 126(11). https://doi.org/10.1103/PhysRevLett.126.118101
- Wang, D.-Y., Melero, C., Albaraky, A., Atherton, P., Jansen, K.A., Dimitracopoulos, A.,... Ballestrem, C. (2021). Vinculin is required for neuronal mechanosensing but not for axon outgrowth. Experimental Cell Research, 407(2). https://doi.org/10.1016/j.yexcr.2021.112805
2020
- Axpe, E., Orive, G., Franze, K., & Appel, E.A. (2020). Towards brain-tissue-like biomaterials. Nature Communications, 11(1). https://doi.org/10.1038/s41467-020-17245-x
- Dimitracopoulos, A., Srivastava, P., Chaigne, A., Win, Z., Shlomovitz, R., Lancaster, O.M.,... Baum, B. (2020). Mechanochemical Crosstalk Produces Cell-Intrinsic Patterning of the Cortex to Orient the Mitotic Spindle. Current Biology, 30(18), 3687-3696.e4. https://doi.org/10.1016/j.cub.2020.06.098
- Franze, K. (2020). Integrating Chemistry and Mechanics: The Forces Driving Axon Growth. In (pp. 61-83). Annual Reviews Inc..
- Jakobs, M.A.H., Franze, K., & Zemel, A. (2020). Mechanical Regulation of Neurite Polarization and Growth: A Computational Study. Biophysical Journal, 118(8), 1914-1920. https://doi.org/10.1016/j.bpj.2020.02.031
- Kjell, J., Fischer-Sternjak, J., Thompson, A.J., Friess, C., Sticco, M.J., Salinas, F.,... Goetz, M. (2020). Defining the Adult Neural Stem Cell Niche Proteome Identifies Key Regulators of Adult Neurogenesis. Cell Stem Cell, 26(2), 277-293.e8. https://doi.org/10.1016/j.stem.2020.01.002
- Kulenkampff, K., Lippert, A.H., Mccoll, J., Santos, A.M., Ponjavic, A., Jenkins, E.,... Klenerman, D. (2020). The Costs of Close Contacts: Visualizing the Energy Landscape of Cell Contacts at the Nanoscale. Biophysical Journal, 118(6), 1261-1269. https://doi.org/10.1016/j.bpj.2020.01.019
- Rezk, R., Jia, B.Z., Wendler, A., Dimov, I., Watts, C., Markaki, A.E.,... Kabla, A.J. (2020). Spatial heterogeneity of cell-matrix adhesive forces predicts human glioblastoma migration. Neuro-Oncology Advances, 2(1). https://doi.org/10.1093/noajnl/vdaa081
- Rheinlaender, J., Dimitracopoulos, A., Wallmeyer, B., Kronenberg, N.M., Chalut, K.J., Gather, M.C.,... Franze, K. (2020). Cortical cell stiffness is independent of substrate mechanics. Nature Materials. https://doi.org/10.1038/s41563-020-0684-x